boot.lucid |
Deprecated function boot.lucid |
boot_lucid |
Inference of LUCID model based on bootstrap resampling |
check_na |
Check missing patterns in omics data Z |
est.lucid |
Deprecated function est.lucid |
est_lucid |
Fit LUCID model to conduct integrated clustering |
fill_data |
Impute missing data by optimizing the likelihood function |
gen_ci |
generate bootstrp ci (normal, basic and percentile) |
helix_data |
HELIX data |
Istep_Z |
I-step of LUCID |
lucid |
Fit a lucid model for integrated analysis on exposure, outcome and multi-omics data |
plot_lucid |
Visualize LUCID model through a Sankey diagram |
predict_lucid |
Predict cluster assignment and outcome based on LUCID model |
print.lucid |
Print the output of 'est_lucid' |
print.sumlucid |
Print the output of LUCID in a nicer table |
sim_data |
A simulated dataset for LUCID |
summary_lucid |
Summarize results of LUCID model |
tune_lucid |
A wrapper function to perform model selection for LUCID |