Spatial Interpolation of Genetic Data

Documentation for package ‘phylin’ version 2.0.2

phylin-package	Phylogenetic Landscape Interpolation.
d.gen	Genetic distance matrix between vipers and lineages.
extract.val	Extact pairwise values from a matrix in a specified order.
gen.variogram	Semi-variogram with the genetic distance matrix
geo.dist	Geographical distance matrix for samples and interpolation locations.
grid	Grid centroids for the Iberian Peninsula.
grid.image	Simple plot of interpolated grid.
gv.model	Fit a model to the semi-variogram.
idw	Inverse Distance Weighting interpolation
intgen.idw	Interpolation of genetic distances to a a grid of points.
krig	Simple and ordinary kriging.
midpoints	Midpoints between pairs of coordinates
mpinv	Generalized inverse of a matrix
mtest.gv	Tests if a 'gv' object has a model.
multispecies	Summarizes data from multiple species.
phylin	Phylogenetic Landscape Interpolation.
plot.gv	Plot a 'gv' object
predict.gv	Predict method for 'gen.variogram' object with model.
print.gv	Prints details of a 'gv' object
simul.env	Simulated environments.
simul.gen.dist	Simulated genetic distances.
simul.sample	Random samples from simulation.
summary.gv	Summary for 'gv' object
vipers	Vipers sample locations for 'd.gen' dataset.